Information for 5-ACTGGGGACGGT (Motif 5)


Reverse Opposite:

p-value:1e-2
log p-value:-4.852e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.02%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets957.7 +/- 522.9bp
Average Position of motif in Background1070.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACTGGGGACGGT
--TGGGGA----

MIG1(MacIsaac)/Yeast

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTGGGGACGGT
AAAACCGGGG-----

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACTGGGGACGGT-
---NGGGGCGGTG

MA0337.1_MIG1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACTGGGGACGGT
-GCGGGGN----

btd/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACTGGGGACGGT-
---GGGGGCGGAT

MA0443.1_btd/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACTGGGGACGGT
--AGGGGGCGGA

MA0344.1_NHP10/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTGGGGACGGT
GCCGGGGA----

MA0154.2_EBF1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACTGGGGACGGT
TCCCTGGGGAN---

MA0268.1_ADR1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACTGGGGACGGT
-GTGGGGT----

shn-ZFP1/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACTGGGGACGGT---
---GGGAACGTTCCC