Information for 4-GTACGTAC (Motif 12)


Reverse Opposite:

p-value:1e0
log p-value:-1.060e+00
Information Content per bp:1.530
Number of Target Sequences with motif119.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif113.0
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets1077.6 +/- 550.7bp
Average Position of motif in Background1095.0 +/- 539.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0027.1_Gmeb1_1/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----GTACGTAC-----
GAGTGTACGTAAGATGG

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTACGTAC
BGCACGTA-

AtSPL3(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------GTACGTAC--
NAANNNGTACGGNAAN

MA0577.1_AtSPL3/Jaspar

Match Rank:4
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------GTACGTAC--
NAANNNGTACGGNAAN

YAP6(MacIsaac)/Yeast

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTACGTAC
TTACATAA

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:6
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------GTACGTAC----
CCCTNCTGTACGGACGNNA

MA0586.1_SPL14/Jaspar

Match Rank:7
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------GTACGTAC----
CCCTNCTGTACGGACGNNA

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTACGTAC
GGGTACGTGC

MA0416.1_YAP3/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTACGTAC-
-TACGTAAT

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTACGTAC
RTACGTGC