Information for 5-TACGAGTATA (Motif 10)


Reverse Opposite:

p-value:1e0
log p-value:-1.934e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.01%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets465.7 +/- 371.3bp
Average Position of motif in Background524.6 +/- 439.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.74
Offset:3
Orientation:forward strand
Alignment:TACGAGTATA-
---GAGTATAA

MA0411.1_UPC2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TACGAGTATA
TATACGA-----

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TACGAGTATA
ANATTTTACGAGNNNN

MA0553.1_SMZ/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TACGAGTATA
GTACGAGG---

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TACGAGTATA
NAATTTTACGAGNTNN

PB0136.1_IRC900814_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TACGAGTATA---
TTTTACGACTTTCCAT

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TACGAGTATA------
TAAGATTATAATACGG

PB0198.1_Zfp128_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TACGAGTATA--
NNTATANATATACN

MA0379.1_SIG1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TACGAGTATA-
------TATAT

ECM22(MacIsaac)/Yeast

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TACGAGTATA
GCTTATACGAG----