Information for 1-TATCACGGAG (Motif 3)


Reverse Opposite:

p-value:1e-1
log p-value:-2.410e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.05%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets387.7 +/- 290.0bp
Average Position of motif in Background201.1 +/- 124.5bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Optix/dmmpmm(Noyes)/fly

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TATCACGGAG
TATCACNT--

MA0199.1_Optix/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TATCACGGAG
TATCA-----

Optix/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TATCACGGAG
NNTATCACTT--

MA0246.1_so/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TATCACGGAG
GTATCA-----

So/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TATCACGGAG
NGTATCATTN--

MA0428.1_YKL222C/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TATCACGGAG--
---AACGGAAAT

MA0298.1_FZF1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TATCACGGAG
CTATCA-----

MA0067.1_Pax2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TATCACGGAG
AGTCACGC--

MA0354.1_PDR8/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TATCACGGAG--
----ACGGAGAT

MA0311.1_HAL9/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TATCACGGAG
-----CGGAA