Information for 2-TCAGGTGACTCA (Motif 2)


Reverse Opposite:

p-value:1e-1
log p-value:-2.618e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets535.7 +/- 283.8bp
Average Position of motif in Background473.6 +/- 286.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0580.1_DYT1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TCAGGTGACTCA--
TCACGTGACTCACG

MA0477.1_FOSL1/Jaspar

Match Rank:2
Score:0.78
Offset:3
Orientation:forward strand
Alignment:TCAGGTGACTCA--
---GGTGACTCATG

MA0490.1_JUNB/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TCAGGTGACTCA-
--GGATGACTCAT

MA0478.1_FOSL2/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:forward strand
Alignment:TCAGGTGACTCA-
--GGATGACTCAT

GCN4(MacIsaac)/Yeast

Match Rank:5
Score:0.76
Offset:4
Orientation:forward strand
Alignment:TCAGGTGACTCA
----ATGACTCA

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:6
Score:0.76
Offset:5
Orientation:forward strand
Alignment:TCAGGTGACTCA
-----TGACTCA

MA0099.2_JUN::FOS/Jaspar

Match Rank:7
Score:0.74
Offset:5
Orientation:forward strand
Alignment:TCAGGTGACTCA
-----TGACTCA

MA0491.1_JUND/Jaspar

Match Rank:8
Score:0.74
Offset:3
Orientation:forward strand
Alignment:TCAGGTGACTCA--
---GGTGACTCATC

ARG81(MacIsaac)/Yeast

Match Rank:9
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TCAGGTGACTCA
----GTGACTCN

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TCAGGTGACTCA---
---NATGACTCATNN