Information for 5-TGGGACGT (Motif 12)


Reverse Opposite:

p-value:1e0
log p-value:-9.818e-01
Information Content per bp:1.530
Number of Target Sequences with motif182.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif175.0
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets490.2 +/- 279.5bp
Average Position of motif in Background481.0 +/- 278.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TGGGACGT----
TATTATGGGATGGATAA

MA0131.1_HINFP/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGGACGT--
GCGGACGTTN

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGGGACGT-
-BGCACGTA

SKO1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGGGACGT
--TGACGT

PB0027.1_Gmeb1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGGGACGT------
NNNTNGTACGTAANNNN

MA0286.1_CST6/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGGGACGT--
-ATGACGTAA

MA0129.1_TGA1A/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGGGACGT-
--TGACGTA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGGGACGT
--TGACGT

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGGGACGT--
--GGACGTGC

h/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGGACGT---
TGGCGCGTGNC