Information for 5-TTCAGCTGAATG (Motif 10)


Reverse Opposite:

p-value:1e0
log p-value:-1.371e+00
Information Content per bp:1.583
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets427.9 +/- 362.4bp
Average Position of motif in Background422.5 +/- 231.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PL0001.1_hlh-11/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGCTGAATG--
NGATCAGCTGATCNNN

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTCAGCTGAATG
-HCAGCTGDTN-

ARR1(MacIsaac)/Yeast

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TTCAGCTGAATG
---ACTTGAAT-

MA0274.1_ARR1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTCAGCTGAATG
---ACTTGAAT-

SIP4(MacIsaac)/Yeast

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTCAGCTGAATG---
CTCGGNTGAATGGAG

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTCAGCTGAATG-----
NTTNTATGAATGTGNNC

E-box/Drosophila-Promoters/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTCAGCTGAATG
AACAGCTGTTHN

SIP4/SIP4_SM/9-SIP4(Harbison)/Yeast

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTCAGCTGAATG---
--CGGNTGAATGGAA

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTCAGCTGAATG
ANCAGCTG----

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGCTGAATG-
NNTNTCATGAATGT