Information for 1-CGTGGGTAGGGG (Motif 1)


Reverse Opposite:

p-value:1e-1
log p-value:-3.466e+00
Information Content per bp:1.583
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets405.4 +/- 225.2bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AtMYB84(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGTGGGTAGGGG-
GGGGGGTAGGTGG

MA0576.1_AtMYB84/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGTGGGTAGGGG-
GGGGGGTAGGTGG

AtMYB15(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGTGGGTAGGGG-
CGACGGTAGGTGG

MA0574.1_AtMYB15/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGTGGGTAGGGG-
CGACGGTAGGTGG

MA0342.1_MSN4/Jaspar

Match Rank:5
Score:0.64
Offset:7
Orientation:forward strand
Alignment:CGTGGGTAGGGG
-------AGGGG

MA0366.1_RGM1/Jaspar

Match Rank:6
Score:0.64
Offset:7
Orientation:forward strand
Alignment:CGTGGGTAGGGG
-------AGGGG

MA0472.1_EGR2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGTGGGTAGGGG
GTGCGTGGGCGGGNG

MA0372.1_RPH1/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CGTGGGTAGGGG-
-----TTAGGGGT

MA0306.1_GIS1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGTGGGTAGGGG-
----NTTAGGGGT

MA0057.1_MZF1_5-13/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CGTGGGTAGGGG---
-----GGAGGGGGAA