Information for 2-TACGCACG (Motif 9)


Reverse Opposite:

p-value:1e0
log p-value:-1.160e+00
Information Content per bp:1.530
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets543.2 +/- 260.6bp
Average Position of motif in Background530.5 +/- 254.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TACGCACG---
---GCACGTAY

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TACGCACG----
NNTTTGCACACGGCCC

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TACGCACG---
---GCACGTNC

Gmeb1/MA0615.1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TACGCACG----
GAGTGTACGTAAGATGG

PB0027.1_Gmeb1_1/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TACGCACG----
GAGTGTACGTAAGATGG

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TACGCACG--
--BGCACGTA

OsbHLH66(bHLH)/Oryza sativa/AthaMap

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TACGCACG-----
TNCGCACGTGCNN

vvl/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TACGCACG
TATGCA--

vvl/MA0254.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TACGCACG
TATGCA--

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TACGCACG---
-TBGCACGCAA