p-value: | 1e0 |
log p-value: | -1.485e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.05% |
Number of Background Sequences with motif | 3.0 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 540.0 +/- 237.1bp |
Average Position of motif in Background | 500.0 +/- 247.2bp |
Strand Bias (log2 ratio + to - strand density) | 2.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Sp1(Zf)/Promoter/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGGCGAGGCGA GGGGGCGGGGCC- |
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![](motif8-1-homer.png)
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PB0180.1_Sp4_2/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGGCGAGGCGA- CAAAGGCGTGGCCAG |
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![](motif8-2-homer.png)
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SP2/MA0516.1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GAGGCGAGGCGA GGGNGGGGGCGGGGC-- |
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![](motif8-3-homer.png)
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SP1/MA0079.3/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGGCGAGGCGA GGGGGCGGGGC-- |
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![](motif8-4-homer.png)
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PB0164.1_Smad3_2/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GAGGCGAGGCGA- NAGANTGGCGGGGNGNA |
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![](motif8-5-homer.png)
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SUT1?/SacCer-Promoters/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAGGCGAGGCGA ---GCGCGGGG- |
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![](motif8-6-homer.png)
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SP4/MA0685.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GAGGCGAGGCGA- NAAGGGGGCGTGGCTTN |
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![](motif8-7-homer.png)
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KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGGCGAGGCGA DGGGYGKGGC-- |
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![](motif8-8-homer.png)
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POL003.1_GC-box/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGGCGAGGCGA AGGGGGCGGGGCTG |
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![](motif8-9-homer.png)
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KLF16/MA0741.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGGCGAGGCGA GGGGGCGTGGC-- |
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![](motif8-10-homer.png)
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