Information for 4-GGGTAGGGGCAG (Motif 7)


Reverse Opposite:

p-value:1e0
log p-value:-1.934e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.06%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets369.0 +/- 213.6bp
Average Position of motif in Background410.2 +/- 162.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGTAGGGGCAG
TGGGGAAGGGCM-

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGTAGGGGCAG
--GGAGGGGGAA

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGGTAGGGGCAG
---TNNGGGCAG

MSN2(MacIsaac)/Yeast

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGGTAGGGGCAG
---AAGGGGC--

AtMYB84(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGTAGGGGCAG
GGGGGGTAGGTGG--

RAX3/MA0576.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGTAGGGGCAG
GGGGGGTAGGTGG--

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGTAGGGGCAG
GGGGGCGGGGC--

MSN4/MA0342.1/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGGTAGGGGCAG
----AGGGG---

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGTAGGGGCAG
GGGGNGGGGC--

RGM1/MA0366.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGGTAGGGGCAG
----AGGGG---