Information for 3-ACGGCGCACT (Motif 5)


Reverse Opposite:

p-value:1e0
log p-value:-1.934e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.06%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets452.5 +/- 249.1bp
Average Position of motif in Background288.4 +/- 145.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DAL82/MA0291.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ACGGCGCACT--
---GCGCACATT

ERF11/MA1001.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACGGCGCACT
NTGNCGGCGN---

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACGGCGCACT
--GGCGCGCT

ERF069/MA0997.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACGGCGCACT
NGGCGGCGN---

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACGGCGCACT-----
NNNNTGAGCACTGTNNG

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACGGCGCACT--
ATAAGGGCGCGCGAT

CRF4/MA0976.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACGGCGCACT
GGCGGCGC---

RAP2-10/MA0980.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACGGCGCACT
GGCGGCGC---

STP2/MA0395.1/Jaspar

Match Rank:9
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------ACGGCGCACT---
NNGNNGTGCGGCGCCGNTNN

brk/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACGGCGCACT
-CGGCGCC--