Information for 3-GCGCGCGGCTGT (Motif 3)


Reverse Opposite:

p-value:1e-1
log p-value:-2.410e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets399.6 +/- 295.5bp
Average Position of motif in Background258.0 +/- 147.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCGCGCGGCTGT----
-GGNGCGNCTGTTNNN

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GCGCGCGGCTGT
TGGCGCGCGCGCCTGA

RSC30/MA0375.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCGGCTGT
CGCGCGCG-----

SUT1?/SacCer-Promoters/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGCGCGGCTGT
GCGCGGGG----

STP1/MA0394.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCGCGCGGCTGT
---TGCGGCGC-

STP1(MacIsaac)/Yeast

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCGCGCGGCTGT
---TGCGGCGC-

RSC3/MA0374.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCGCGCGGCTGT
-CGCGCGG----

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGCGCGGCTGT
TAGCGCGC------

CRZ1(MacIsaac)/Yeast

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCGCGCGGCTGT
----GAGGCTG-

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GCGCGCGGCTGT
ATAAAGGCGCGCGAT---