Information for 5-TVSGACGT (Motif 12)


Reverse Opposite:

p-value:1e0
log p-value:-1.046e+00
Information Content per bp:1.523
Number of Target Sequences with motif359.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif348.1
Percentage of Background Sequences with motif3.38%
Average Position of motif in Targets502.7 +/- 279.0bp
Average Position of motif in Background496.2 +/- 279.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP910/MA0096.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TVSGACGT
-ATGACGT

SKO1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:TVSGACGT
--TGACGT

CST6/MA0286.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TVSGACGT--
-ATGACGTAA

TGA1A/MA0129.1/Jaspar

Match Rank:4
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TVSGACGT-
--TGACGTA

TGA5/MA1047.1/Jaspar

Match Rank:5
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TVSGACGT-
-ATGACGTA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TVSGACGT
--TGACGT

Crem/MA0609.1/Jaspar

Match Rank:7
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TVSGACGT--
TATGACGTAA

SKO1(MacIsaac)/Yeast

Match Rank:8
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TVSGACGT-
-ATGACGTA

TGA6/MA1069.1/Jaspar

Match Rank:9
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TVSGACGT--
GATGACGTCA

Atf1/MA0604.1/Jaspar

Match Rank:10
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TVSGACGT-
-ATGACGTA