Information for 4-CGTAACTT (Motif 11)


Reverse Opposite:

p-value:1e0
log p-value:-1.140e+00
Information Content per bp:1.530
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif35.0
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets458.7 +/- 282.3bp
Average Position of motif in Background456.7 +/- 275.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARR11/MA0946.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CGTAACTT
CGTATCTT

tll/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CGTAACTT-
--TGACTTT

NAC025/MA0935.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGTAACTT
TACGTAAC--

ARR14/MA0947.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGTAACTT
GCGTATCT-

ARR18/MA0948.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGTAACTT---
NNCGTATCTNNNN

YAP3/MA0416.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGTAACTT
TACGTAAT--

ARR2/MA0949.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGTAACTT-
GCGAATCTTT

tll/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGTAACTT-
-TTGACTTT

DAL82(MacIsaac)/Yeast

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGTAACTT-
GCGCAANTTT

NAC083/MA1043.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGTAACTT
ATACGCAACC-