Information for 5-CTGTTCGACT (Motif 9)


Reverse Opposite:

p-value:1e-1
log p-value:-2.410e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets1398.0 +/- 547.4bp
Average Position of motif in Background1774.3 +/- 110.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0261.1_lin-14/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGTTCGACT
GTGTTC----

MA0261.1_lin-14/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGTTCGACT
GTGTTC----

OPI1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGTTCGACT
-GATTCGA--

OPI1(MacIsaac)/Yeast

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGTTCGACT
CGGTTCG---

YER051W(MacIsaac)/Yeast

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTGTTCGACT
---TTCGAA-

MA0414.1_XBP1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGTTCGACT
--NCTCGAG-

MA0319.1_HSF1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGTTCGACT
-TGTTCCAT-

MA0349.1_OPI1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGTTCGACT
CGGTTCG---

MA0210.1_ara/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTTCGACT
-TGTTA----

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGTTCGACT
GCTGTG-----