Information for 4-TGAAACGCAAAA (Motif 4)


Reverse Opposite:

p-value:1e-1
log p-value:-4.160e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets876.8 +/- 501.2bp
Average Position of motif in Background363.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TGAAACGCAAAA
--AAACGCGAAA

MA0393.1_STE12/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAAAA
TGAAACA-----

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TGAAACGCAAAA
---GACGCGAAA

STE12(MacIsaac)/Yeast

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAAAA
TGAAACA-----

STE12/STE12_Alpha/92-STE12(Harbison)/Yeast

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAAAA
TGAAACA-----

DIG1/DIG1_YPD/32-STE12(Harbison)/Yeast

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAAAA
TGAAACA-----

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGAAACGCAAAA
----ACGCGAAA

SWI4(MacIsaac)/Yeast

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TGAAACGCAAAA-
----ACGCGAAAA

MA0401.1_SWI4/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGAAACGCAAAA
----ACGCGAAA

MA0295.1_FHL1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGAAACGCAAAA
---GACGCAAA-