Information for 3-CACCAACCCTTC (Motif 3)


Reverse Opposite:

p-value:1e-1
log p-value:-4.160e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets1101.5 +/- 430.1bp
Average Position of motif in Background999.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

P(MYB)/Zea mays/AthaMap

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CACCAACCCTTC
-ACCTACCCG--

Kr/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CACCAACCCTTC
---TAACCCTTT

AtMYB84(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CACCAACCCTTC
CCACCTACCCCCC

MA0576.1_AtMYB84/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CACCAACCCTTC
CCACCTACCCCCC

AtMYB15(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACCAACCCTTC
CCACCTACCGTCG

MA0574.1_AtMYB15/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACCAACCCTTC
CCACCTACCGTCG

Kr/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CACCAACCCTTC-
----AACCCTTTT

MA0452.2_KR/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACCAACCCTTC---
-TTTAACCCTTTTTC

Kr/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CACCAACCCTTC--
---TAACCCTTTNG

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CACCAACCCTTC
--CCGCCCCTT-