Information for 5-TAKGACGT (Motif 15)


Reverse Opposite:

p-value:1e0
log p-value:-1.110e+00
Information Content per bp:1.884
Number of Target Sequences with motif549.0
Percentage of Target Sequences with motif7.24%
Number of Background Sequences with motif534.9
Percentage of Background Sequences with motif7.06%
Average Position of motif in Targets1016.7 +/- 556.7bp
Average Position of motif in Background1016.6 +/- 555.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0286.1_CST6/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:TAKGACGT--
-ATGACGTAA

MA0096.1_bZIP910/Jaspar

Match Rank:2
Score:0.86
Offset:1
Orientation:forward strand
Alignment:TAKGACGT
-ATGACGT

SKO1(MacIsaac)/Yeast

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:TAKGACGT-
-ATGACGTA

SKO1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:TAKGACGT
--TGACGT

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.84
Offset:2
Orientation:forward strand
Alignment:TAKGACGT
--TGACGT

MA0129.1_TGA1A/Jaspar

Match Rank:6
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:TAKGACGT-
--TGACGTA

STF1(bZIP)/Glycine max/AthaMap

Match Rank:7
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TAKGACGT----
AATGACGTCATT

MA0588.1_TGA1/Jaspar

Match Rank:8
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TAKGACGT--
TGGTGACGTAA

MA0018.2_CREB1/Jaspar

Match Rank:9
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TAKGACGT--
--TGACGTCA

TGA1(bZIP)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TAKGACGT--
TTGATGACGTTA