Information for 3-TATTTCGA (Motif 13)


Reverse Opposite:

p-value:1e0
log p-value:-1.285e+00
Information Content per bp:1.530
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif49.0
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets964.1 +/- 582.9bp
Average Position of motif in Background965.1 +/- 573.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0414.1_XBP1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TATTTCGA-
--NCTCGAG

YER051W(MacIsaac)/Yeast

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:TATTTCGA-
---TTCGAA

RLM1(MacIsaac)/Yeast

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TATTTCGA--
TATTTATAGA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TATTTCGA--
KCTATTTTTRGH

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TATTTCGA-
CTATTTTTGG

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TATTTCGA
TATGTNTA

MA0011.1_br_Z2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TATTTCGA
TACTATTT---

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TATTTCGA-
TTATTTTTAG

MA0391.1_STB4/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TATTTCGA-
--TTCCGAG

MA0497.1_MEF2C/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TATTTCGA----
TTCTATTTTTAGNNN