Information for 2-GATTACCG (Motif 12)


Reverse Opposite:

p-value:1e0
log p-value:-1.349e+00
Information Content per bp:1.871
Number of Target Sequences with motif421.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif402.9
Percentage of Background Sequences with motif5.32%
Average Position of motif in Targets1021.8 +/- 558.7bp
Average Position of motif in Background1021.7 +/- 561.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0438.1_YRM1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GATTACCG-
-ATTTCCGT

Gsc/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GATTACCG
GGATTA---

MA0190.1_Gsc/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GATTACCG
GGATTA---

MA0434.1_YPR013C/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GATTACCG
NGATCTACA

MA0354.1_PDR8/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GATTACCG-
-ATCTCCGN

MA0428.1_YKL222C/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GATTACCG--
-ATTTCCGTT

bcd/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GATTACCG
NGGATTANN-

Gsc/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GATTACCG
NGGATTAANN

MA0234.1_oc/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GATTACCG
GGATTA---

MA0212.1_bcd/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GATTACCG
GGATTA---