Information for 1-CTCTGAGTCCCA (Motif 1)


Reverse Opposite:

p-value:1e-2
log p-value:-5.547e+00
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets1087.5 +/- 658.5bp
Average Position of motif in Background1850.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap1/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCTGAGTCCCA
--CTGAGTCAC-

GCN4(MacIsaac)/Yeast

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTCTGAGTCCCA
---TGAGTCAT-

MA0477.1_FOSL1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCTGAGTCCCA
-NATGAGTCACC

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCTGAGTCCCA
---TGAGTCA--

MA0490.1_JUNB/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCTGAGTCCCA-
--ATGAGTCATCN

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGAGTCCCA
CGCGCTGAGCN---

MA0579.1_CDC5/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGAGTCCCA
CGCGCTGAGCN---

ARG81(MacIsaac)/Yeast

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCTGAGTCCCA
---NGAGTCAC-

MA0272.1_ARG81/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCTGAGTCCCA
---NGAGTCAC-

MA0478.1_FOSL2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCTGAGTCCCA-
--NTGAGTCATCN