Information for 5-TGAAACGCAA (Motif 7)


Reverse Opposite:

p-value:1e0
log p-value:-1.935e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets432.2 +/- 272.1bp
Average Position of motif in Background332.6 +/- 251.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0393.1_STE12/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAA
TGAAACA---

STE12(MacIsaac)/Yeast

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAA
TGAAACA---

STE12/STE12_Alpha/92-STE12(Harbison)/Yeast

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAA
TGAAACA---

DIG1/DIG1_YPD/32-STE12(Harbison)/Yeast

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAA
TGAAACA---

DIG1(MacIsaac)/Yeast

Match Rank:5
Score:0.68
Offset:-9
Orientation:forward strand
Alignment:---------TGAAACGCAA
ANACANTTNTGAAACA---

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGAAACGCAA--
AGAAACGAAAGT

MA0242.1_run::Bgb/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGAAACGCAA
-TAACCGCAA

CST6(MacIsaac)/Yeast

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGAAACGCAA
-NAAATGCA-

MA0204.1_Six4/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAA
TGATAC----

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGAAACGCAA--
--AAACGCGAAA