Information for 4-TTAGGGCCTC (Motif 6)


Reverse Opposite:

p-value:1e0
log p-value:-1.935e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets604.5 +/- 229.5bp
Average Position of motif in Background584.7 +/- 264.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0403.1_TBF1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTAGGGCCTC
NTAGGGTT--

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTAGGGCCTC-
---AGGCCTAG

pho/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGGCCTC
GCCGTTATGGCTTC

MA0372.1_RPH1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTAGGGCCTC
TTAGGGGT--

MA0381.1_SKN7/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAGGGCCTC
--NTGGCC--

caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGGCCTC
WTTTATGRCC--

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGGCCTC
GGTTAGAGACCT

GCR1(MacIsaac)/Yeast

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTAGGGCCTC--
---GGGCTTCCA

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTAGGGCCTC
-CNAGGCCT-

PCF/Arabidopsis-Promoters/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTAGGGCCTC--
NNWWWTGGGCYTDDN