Information for 2-TCCTTGTGTA (Motif 4)


Reverse Opposite:

p-value:1e0
log p-value:-2.179e+00
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets361.0 +/- 329.6bp
Average Position of motif in Background423.1 +/- 382.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bin/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TCCTTGTGTA
TCGTTGTTTA

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTGTGTA--
NNNCCATTGTGTNAN

MA0442.1_SOX10/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCTTGTGTA
-CTTTGT---

MA0327.1_MATA1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCCTTGTGTA
--ATTGTGC-

MATA1(MacIsaac)/Yeast

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCCTTGTGTA
--ATTGTGC-

FKH1/FKH1_YPD/53-FKH1,53-FKH2(Harbison)/Yeast

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCCTTGTGTA-
---TTGTTTAC

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTGTGTA---
ANTCCTTTGTCTNNNN

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:8
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TCCTTGTGTA------
ACCGCCNTCCACGTGTANNGACA

MA0109.1_Hltf/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCCTTGTGTA
AACCTTATAT-

FKH1(MacIsaac)/Yeast

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCCTTGTGTA-----
---TTGTTTACNTTT