Information for 1-GCCCCCCCGA (Motif 3)


Reverse Opposite:

p-value:1e0
log p-value:-2.179e+00
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets473.4 +/- 292.2bp
Average Position of motif in Background511.2 +/- 283.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0362.1_RDS2/Jaspar

Match Rank:1
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:GCCCCCCCGA-
----CCCCGAN

MA0456.1_opa/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCCCCCCCGA--
GACCCCCCGCTG

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GCCCCCCCGA---
AAGCCCCCCAAAAAT

opa/dmmpmm(Noyes)/fly

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCCCCCCCGA--
GACCCCCCGCTG

PB0100.1_Zfp740_1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCCCCCCCGA----
CCCCCCCCCCCACTTG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCCCCCCCGA
-CCCCCCCC-

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCCCCCCCGA--
TATCGACCCCCCACAG

PB0204.1_Zfp740_2/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCCCCCCCGA---
AAATTCCCCCCGGAAGT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCCCCCCCGA---
ATCCCCGCCCCTAAAA

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCCCCCCGA-
TCCGCCCCCGCATT