Information for 4-CCTGCCCCCGCC (Motif 13)


Reverse Opposite:

p-value:1e0
log p-value:-1.308e+00
Information Content per bp:1.988
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets464.2 +/- 216.3bp
Average Position of motif in Background364.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CCTGCCCCCGCC
CCCCCGCCCCCGCC

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCTGCCCCCGCC--
TCCGCCCCCGCATT

SUT1/SUT1_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCTGCCCCCGCC
-CCGGCCCCGC-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CCTGCCCCCGCC
----CCCCCCCC

PB0097.1_Zfp281_1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CCTGCCCCCGCC
TCCCCCCCCCCCCCC

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCTGCCCCCGCC-
GCCCCGCCCCCTCCC

MA0338.1_MIG2/Jaspar

Match Rank:7
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CCTGCCCCCGCC
-----CCCCGCA

MA0337.1_MIG1/Jaspar

Match Rank:8
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCTGCCCCCGCC
----CCCCCGC-

MA0339.1_MIG3/Jaspar

Match Rank:9
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CCTGCCCCCGCC
-----CCCCGCA

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCTGCCCCCGCC---
---GGCCCCGCCCCC