Information for 4-CGTATGGG (Motif 11)


Reverse Opposite:

p-value:1e0
log p-value:-1.380e+00
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets430.4 +/- 325.8bp
Average Position of motif in Background449.3 +/- 362.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0359.1_RAP1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGTATGGG--
TGTATGGGTG

MA0057.1_MZF1_5-13/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGTATGGG---
-GGAGGGGGAA

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGTATGGG-
ATGTACGGGT

SFP1(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGTATGGG-
ATGTACGGGT

MA0411.1_UPC2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGTATGGG
TCGTATA--

RAP1(MacIsaac)/Yeast

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGTATGGG---
GTGTATGGGTGT

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGTATGGG--
TGTACGGGTG

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGTATGGG
VBSYGTCTGG-

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CGTATGGG---
TNNTTTCGTATTNNANN

MA0382.1_SKO1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGTATGGG
ACGTAATG-