Information for 4-TGCAGCGAAG (Motif 8)


Reverse Opposite:

p-value:1e-1
log p-value:-2.619e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets1256.8 +/- 487.5bp
Average Position of motif in Background1085.2 +/- 513.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCAGCGAAG
TGCAGGNA--

MA0355.1_PHD1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGCGAAG
NGNTGCAGGN---

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGCGAAG--
NNNANTGCAGTGCNNTT

MA0385.1_SOK2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCAGCGAAG
ACCTGCAGGCA--

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TGCAGCGAAG-
-----NGAAGC

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGCAGCGAAG
--CAGCC---

MA0014.2_PAX5/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGCAGCGAAG------
GAGGGCAGCCAAGCGTGAC

MA0368.1_RIM101/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGCAGCGAAG
---CGCCAAG

MA0144.2_STAT3/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCAGCGAAG
CTTCTGGGAAA

MA0123.1_abi4/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGCGAAG
GGGGGCACCG---