Information for 1-CCCCCGACCG (Motif 6)


Reverse Opposite:

p-value:1e-1
log p-value:-3.350e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets932.4 +/- 516.6bp
Average Position of motif in Background536.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0362.1_RDS2/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCCCCGACCG
-CCCCGAN--

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCCCCGACCG
-CCCCCCCC-

AtMYB15(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCCCCGACCG---
CCACCTACCGTCG

MA0574.1_AtMYB15/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCCCCGACCG---
CCACCTACCGTCG

MA0344.1_NHP10/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCCCGACCG
TCCCCGGC--

MA0364.1_REI1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCCCCGACCG
CCCCTGA---

SeqBias: polyC-repeat

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCCCGACCG
CCCCCCCCCC-

MA0456.1_opa/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGACCG
GACCCCCCGCTG

opa/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCGACCG
GACCCCCCGCTG

MA0341.1_MSN2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCCCGACCG
CCCCT-----