Information for 5-GGTAATCG (Motif 13)


Reverse Opposite:

p-value:1e0
log p-value:-1.307e+00
Information Content per bp:1.530
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets1006.2 +/- 515.6bp
Average Position of motif in Background948.3 +/- 481.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

prd/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGTAATCG
NGTAATGG

Gsc/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GGTAATCG
--TAATCC

MA0190.1_Gsc/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GGTAATCG
--TAATCC

BH1/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGTAATCG-
NGTTAATTGN

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGTAATCG
GKTAATGR

ap/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGTAATCG
--TAATNN

Gsc/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGTAATCG-
NNTTAATCCN

MA0363.1_REB1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GGTAATCG
CCGGGTAAC--

MA0234.1_oc/Jaspar

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGTAATCG
--TAATCC

bcd/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGTAATCG-
CCTAATCCC