Information for 2-GACGCATA (Motif 11)


Reverse Opposite:

p-value:1e0
log p-value:-1.451e+00
Information Content per bp:1.530
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif32.0
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets1125.3 +/- 590.4bp
Average Position of motif in Background1109.9 +/- 595.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0295.1_FHL1/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GACGCATA
GACGCAAA

MBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GACGCATA
GACGCGT-

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GACGCATA
GACGCGT-

ARG80(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GACGCATA
AGACGC---

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GACGCATA--
GAATGACGAATAAC

MA0271.1_ARG80/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GACGCATA
AGACGC---

MA0288.1_CUP9/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACGCATA
TGACACATT

RTG3(MacIsaac)/Yeast

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GACGCATA
ATGACTCA--

SWI6(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GACGCATA
GACGCG--

YAP5(MacIsaac)/Yeast

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GACGCATA
-AAGCAT-