Information for 1-TGAGTTTGGTTT (Motif 1)


Reverse Opposite:

p-value:1e-2
log p-value:-4.854e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets729.9 +/- 429.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0037.1_Isgf3g_1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGAGTTTGGTTT---
TNAGTTTCGATTTTN

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGAGTTTGGTTT--
--ACTTTCGTTTCT

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGAGTTTGGTTT---
TCAGTTTCATTTTCC

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGAGTTTGGTTT---
NTGGTTTCGGTTNNN

MA0511.1_RUNX2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGAGTTTGGTTT-
GGGGTTTGTGGTTTG

MA0313.1_HAP2/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGAGTTTGGTTT
-----TTGGT--

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGAGTTTGGTTT-
-----TTGATTTC

SPT23(MacIsaac)/Yeast

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGAGTTTGGTTT-
-----TTGATTTC

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGAGTTTGGTTT---
-CAGTTTCGNTTCTN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGAGTTTGGTTT-
---CTGTGGTTTN