Information for 5-TGGTTAGGGGCN (Motif 8)


Reverse Opposite:

p-value:1e0
log p-value:-1.485e+00
Information Content per bp:1.457
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets487.7 +/- 188.4bp
Average Position of motif in Background583.4 +/- 86.2bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0372.1_RPH1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:TGGTTAGGGGCN
---TTAGGGGT-

MA0341.1_MSN2/Jaspar

Match Rank:2
Score:0.73
Offset:5
Orientation:forward strand
Alignment:TGGTTAGGGGCN
-----AGGGG--

MA0342.1_MSN4/Jaspar

Match Rank:3
Score:0.73
Offset:5
Orientation:forward strand
Alignment:TGGTTAGGGGCN
-----AGGGG--

MSN2(MacIsaac)/Yeast

Match Rank:4
Score:0.72
Offset:4
Orientation:forward strand
Alignment:TGGTTAGGGGCN
----AAGGGGC-

MA0366.1_RGM1/Jaspar

Match Rank:5
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TGGTTAGGGGCN
-----AGGGG--

MA0306.1_GIS1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGGTTAGGGGCN
--NTTAGGGGT-

MA0423.1_YER130C/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGGTTAGGGGCN
--NATAGGGGN-

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGGTTAGGGGCN-----
-NNTNAGGGGCGGNNNN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGGTTAGGGGCN
-GGGGGGGG---

MA0364.1_REI1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGGTTAGGGGCN
---TCAGGGG--