Information for 4-NGGGAGTCCGGG (Motif 5)


Reverse Opposite:

p-value:1e-1
log p-value:-2.412e+00
Information Content per bp:1.450
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets582.3 +/- 288.5bp
Average Position of motif in Background587.5 +/- 224.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----NGGGAGTCCGGG-
NTNNNAGGAGTCTCNTN

ADR1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:NGGGAGTCCGGG
-NGGAGG-----

ADR1(MacIsaac)/Yeast

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:NGGGAGTCCGGG
-NGGAGG-----

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:NGGGAGTCCGGG
-GGGAGGACNG-

ARF1(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:NGGGAGTCCGGG
TGGGAGACAAG-

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----NGGGAGTCCGGG
NTNTGGGGGGTCNNNA

MA0270.1_AFT2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:NGGGAGTCCGGG
GGGGTGTG----

GCR1(MacIsaac)/Yeast

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:NGGGAGTCCGGG
TGGAAGCCC---

MA0280.1_CAT8/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:NGGGAGTCCGGG
-----NTCCGG-

MA0056.1_MZF1_1-4/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-NGGGAGTCCGGG
TGGGGA-------