Information for 5-GATTACCC (Motif 12)


Reverse Opposite:

p-value:1e0
log p-value:-1.293e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets608.0 +/- 158.3bp
Average Position of motif in Background543.0 +/- 138.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0363.1_REB1/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GATTACCC--
-GTTACCCGG

REB1/REB1_YPD/61-REB1(Harbison)/Yeast

Match Rank:2
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GATTACCC-
--TTACCCG

REB1/SacCer-Promoters/Homer

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GATTACCC---
YYRTTACCCGGM

REB1(MacIsaac)/Yeast

Match Rank:4
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GATTACCC--
--TTACCCGG

Gsc/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GATTACCC
GGATTA---

MA0190.1_Gsc/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GATTACCC
GGATTA---

bcd/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GATTACCC
NGGATTAACC

STB2(MacIsaac)/Yeast

Match Rank:8
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GATTACCC-
-NTTACCCG

MA0234.1_oc/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GATTACCC
GGATTA---

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GATTACCC
RGGATTAR--