Information for 4-ACTACGTC (Motif 11)


Reverse Opposite:

p-value:1e0
log p-value:-1.293e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets390.1 +/- 232.8bp
Average Position of motif in Background300.8 +/- 196.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SKO1(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:ACTACGTC--
--TACGTCAT

MA0129.1_TGA1A/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:ACTACGTC-
--TACGTCA

MA0382.1_SKO1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ACTACGTC
CATTACGT-

MA0286.1_CST6/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACTACGTC--
-TTACGTCAT

SKO1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACTACGTC-
---ACGTCA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:ACTACGTC-
---ACGTCA

MA0096.1_bZIP910/Jaspar

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:ACTACGTC--
---ACGTCAG

PB0131.1_Gmeb1_2/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ACTACGTC-----
TNAACGACGTCGNCCA

STF1(bZIP)/Glycine max/AthaMap

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACTACGTC---
NATGACGTCATC

MA0416.1_YAP3/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACTACGTC
ATTACGTA