Information for 5-AGTCCTCACT (Motif 10)


Reverse Opposite:

p-value:1e0
log p-value:-1.371e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets370.5 +/- 278.9bp
Average Position of motif in Background370.2 +/- 303.8bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AGTCCTCACT--
CGAACAGTGCTCACTAT

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGTCCTCACT
-GTCCTAA--

eyg/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGTCCTCACT--------
GAGTANTCACTGAGTNNGN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGTCCTCACT
CNGTCCTCCC-

Su(H)/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTCCTCACT---
TAGTTCTCACATTC

Su(H)/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGTCCTCACT
-GTTCCCACG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCTCACT
CNAGGCCT----

Unknown2/Drosophila-Promoters/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGTCCTCACT-
---CATCMCTA

MA0056.1_MZF1_1-4/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGTCCTCACT
--TCCCCA--

MA0436.1_YPR022C/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGTCCTCACT
---CCCCACG