Information for 4-TCCGGGTGCC (Motif 8)


Reverse Opposite:

p-value:1e-1
log p-value:-2.411e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets1130.1 +/- 402.1bp
Average Position of motif in Background1189.9 +/- 474.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AFT2(MacIsaac)/Yeast

Match Rank:1
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:TCCGGGTGCC
---GGGTGCA

YDR026C(MacIsaac)/Yeast

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TCCGGGTGCC
-CCGGGT---

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:3
Score:0.77
Offset:3
Orientation:forward strand
Alignment:TCCGGGTGCC
---GGGTGC-

RCS1(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TCCGGGTGCC
---GGGTGCA

MA0280.1_CAT8/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCCGGGTGCC
NTCCGG-----

MA0270.1_AFT2/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TCCGGGTGCC
--GGGGTGTG

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCCGGGTGCC--
---GGGTGCANT

PHD1(MacIsaac)/Yeast

Match Rank:8
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TCCGGGTGCC-
-----GTGCCT

MA0275.1_ASG1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCCGGGTGCC
TTCCGG-----

PB0077.1_Spdef_1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TCCGGGTGCC-
GTACATCCGGATTTTT