Information for 3-GTTTCACTTCCC (Motif 3)


Reverse Opposite:

p-value:1e-1
log p-value:-3.423e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets1164.4 +/- 557.5bp
Average Position of motif in Background831.2 +/- 463.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GTTTCACTTCCC
GTTTCACTTCCG

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---GTTTCACTTCCC
TCAGTTTCATTTTCC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCACTTCCC
ACTTTCACTTTC-

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GTTTCACTTCCC
AGTTTCAGTTTC-

MA0051.1_IRF2/Jaspar

Match Rank:5
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------GTTTCACTTCCC
GTTTTGCTTTCACTTTCC

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCACTTCCC
RSTTTCRSTTTC-

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTTTCACTTCCC
ACTTTCACTTTC-

MA0050.2_IRF1/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GTTTCACTTCCC----
TTTTACTTTCACTTTCACTTT

MA0393.1_STE12/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCACTTCCC
TGTTTCA------

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCACTTCCC
CAGTTTCGNTTCTN