Information for 2-TGAAACGCAAAA (Motif 2)


Reverse Opposite:

p-value:1e-1
log p-value:-4.161e+00
Information Content per bp:1.856
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets876.8 +/- 501.2bp
Average Position of motif in Background363.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0393.1_STE12/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAAAA
TGAAACA-----

STE12(MacIsaac)/Yeast

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAAAA
TGAAACA-----

STE12/STE12_Alpha/92-STE12(Harbison)/Yeast

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAAAA
TGAAACA-----

DIG1/DIG1_YPD/32-STE12(Harbison)/Yeast

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAAAA
TGAAACA-----

cad/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGAAACGCAAAA
--AANCATAAA-

MA0010.1_br_Z1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGAAACGCAAAA-
GTAATAAACAAATC

DIG1(MacIsaac)/Yeast

Match Rank:7
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------TGAAACGCAAAA
ANACANTTNTGAAACA-----

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGAAACGCAAAA
--AAACGCGAAA

SIG1/SIG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGAAACGCAAAA
AGGAAACAACAA-

br-Z1/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGAAACGCAAAA
TAAAAAACAAAA