Information for 4-CCGATGTA (Motif 12)


Reverse Opposite:

p-value:1e0
log p-value:-1.380e+00
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets1067.4 +/- 488.2bp
Average Position of motif in Background1126.9 +/- 472.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tal1

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCGATGTA
CAGATG--

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCGATGTA------
AGGACGCTGTAAAGGGA

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCGATGTA------
AAGACGCTGTAAAGCGA

MA0362.1_RDS2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCGATGTA
CCCCGAN---

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGATGTA
GGTAAGTA

TEIL(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCGATGTA---
---ATGTACCT

MA0318.1_HMRA2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGATGTA--
--CATGTAAT

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCGATGTA--
ATGATGCAAT

PL0012.1_hlh-2::hlh-8/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCGATGTA---
NANACCAGATGTTTNN

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGATGTA--
MTGATGCAAT