Information for 4-TTTCDGTTTC (Motif 6)


Reverse Opposite:

p-value:1e-30
log p-value:-6.947e+01
Information Content per bp:1.725
Number of Target Sequences with motif895.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif475.4
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets12.7 +/- 4.5bp
Average Position of motif in Background12.5 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:1
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TTTCDGTTTC
RSTTTCRSTTTC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--TTTCDGTTTC
ACTTTCACTTTC

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TTTCDGTTTC
AGTTTCAGTTTC

blmp-1/MA0537.1/Jaspar

Match Rank:4
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TTTCDGTTTC
TTTTCNCTTTT

IRF7/MA0772.1/Jaspar

Match Rank:5
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--TTTCDGTTTC--
ANTTTCGCTTTCGN

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----TTTCDGTTTC-
TCAGTTTCATTTTCC

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.84
Offset:-6
Orientation:forward strand
Alignment:------TTTCDGTTTC-----
TTTTACTTTCACTTTCACTTT

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--TTTCDGTTTC--
AGTTTCGGTTTCGN

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--TTTCDGTTTC
ASTTTCACTTCC

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.82
Offset:-7
Orientation:reverse strand
Alignment:-------TTTCDGTTTC-
GTTTTGCTTTCACTTTCC