Information for 1-TGASTCAKNNBWNN (Motif 1)


Reverse Opposite:

p-value:1e-56
log p-value:-1.294e+02
Information Content per bp:1.559
Number of Target Sequences with motif777.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif275.9
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets13.1 +/- 4.2bp
Average Position of motif in Background12.9 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-TGASTCAKNNBWNN
ATGASTCATH-----

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.98
Offset:-3
Orientation:reverse strand
Alignment:---TGASTCAKNNBWNN
NNVTGASTCATN-----

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:3
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--TGASTCAKNNBWNN
DATGASTCATHN----

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--TGASTCAKNNBWNN
NATGACTCATNN----

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-TGASTCAKNNBWNN
ATGACTCATC-----

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:6
Score:0.97
Offset:-3
Orientation:forward strand
Alignment:---TGASTCAKNNBWNN
NNATGASTCATH-----

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:7
Score:0.96
Offset:0
Orientation:forward strand
Alignment:TGASTCAKNNBWNN
TGACTCA-------

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-TGASTCAKNNBWNN
ATGAGTCATCN----

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--TGASTCAKNNBWNN
TGTGACTCATT-----

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-TGASTCAKNNBWNN
ATGAGTCATNTNNT-