Information for 4-GGTGTGAGCCACCV (Motif 7)


Reverse Opposite:

p-value:1e-7
log p-value:-1.825e+01
Information Content per bp:1.739
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets13.3 +/- 3.8bp
Average Position of motif in Background13.2 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MGA/MA0801.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAGCCACCV
AGGTGTGA-------

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAGCCACCV
AGGTGTGA-------

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAGCCACCV
AGGTGTGA-------

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAGCCACCV
AGGTGTGA-------

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGAGCCACCV
AGGTGTGA-------

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGTGTGAGCCACCV
---NTGAGTCATCN

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTGAGCCACCV
AGGTGNCAGACAG--

PB0142.1_Jundm2_2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTGTGAGCCACCV--
NNGGTGACTCATCANN

GCN4/MA0303.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTGTGAGCCACCV----
CAAGGGATGAGTCATACTTCA

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGTGTGAGCCACCV
--TGGGGCCCAC--