Information for 2-CCCCCCCCCC (Motif 4)


Reverse Opposite:

p-value:1e-10
log p-value:-2.427e+01
Information Content per bp:1.841
Number of Target Sequences with motif206.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif93.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets12.8 +/- 3.5bp
Average Position of motif in Background12.3 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: polyC-repeat

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CCCCCCCCCC
CCCCCCCCCC

PB0097.1_Zfp281_1/Jaspar

Match Rank:2
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CCCCCCCCCC--
TCCCCCCCCCCCCCC

ZNF740/MA0753.1/Jaspar

Match Rank:3
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CCCCCCCCCC
CCCCCCCCAC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:CCCCCCCCCC
-CCCCCCCC-

PB0100.1_Zfp740_1/Jaspar

Match Rank:5
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---CCCCCCCCCC---
CCCCCCCCCCCACTTG

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCCCCC
GCCCCGCCCCC

KLF16/MA0741.1/Jaspar

Match Rank:7
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCCCCC
GCCACGCCCCC

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCCCCC
GCCCCGCCCC-

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCCCCC---
CCCCCGCCCCCGCC

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCCCCC----
GCCCCGCCCCCTCCC