Information for 2-NATTCCAD (Motif 2)


Reverse Opposite:

p-value:1e-23
log p-value:-5.367e+01
Information Content per bp:1.543
Number of Target Sequences with motif5497.0
Percentage of Target Sequences with motif12.15%
Number of Background Sequences with motif4539.1
Percentage of Background Sequences with motif10.05%
Average Position of motif in Targets13.1 +/- 5.5bp
Average Position of motif in Background13.1 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-NATTCCAD-
GCATTCCAGN

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-NATTCCAD-
ATTTTCCATT

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:NATTCCAD
TTTTCCA-

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-NATTCCAD-
ATTTTCCATT

HSF1/MA0319.1/Jaspar

Match Rank:5
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:NATTCCAD
TGTTCCAT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-NATTCCAD-
RCATTCCWGG

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-NATTCCAD
ACATTCCA-

Ik-1

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--NATTCCAD---
GGTATTCCCAANN

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-NATTCCAD-
RCATTCCWGG

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-NATTCCAD-
ATTTTCCATT