Information for 8-GTGTGTGTGT (Motif 11)


Reverse Opposite:

p-value:1e-2
log p-value:-6.850e+00
Information Content per bp:1.738
Number of Target Sequences with motif780.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif662.3
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets13.0 +/- 5.4bp
Average Position of motif in Background13.0 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTGTGT
TGTGTGTGTG-

daf-12/MA0538.1/Jaspar

Match Rank:2
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GTGTGTGTGT---
GTGTGTGTGTGCGTG

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTGTGT----
NNGCGTGTGTGCNGCN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTGTGT
TGCGTGGGYG-

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTGTGTGTGT--
GGGGGTGTGTCC

RAP1(MacIsaac)/Yeast

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTGTGTGTGT--
GTGTATGGGTGT

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTGTGT-
NGCGTGGGCGGR

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTGTGT----
GGNGCGNCTGTTNNN

MET31(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTGTGT
GGTGTGGC---

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTGTGT-
RGTGGGYGTGGC