Information for 1-TGACTCGT (Motif 1)


Reverse Opposite:

p-value:1e-23
log p-value:-5.369e+01
Information Content per bp:1.891
Number of Target Sequences with motif218.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif56.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets12.8 +/- 3.4bp
Average Position of motif in Background12.1 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BAS1(MacIsaac)/Yeast

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TGACTCGT--
TGACTCTTNC

BAS1/BAS1_SM/2-BAS1(Harbison)/Yeast

Match Rank:2
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TGACTCGT
TGACTC--

ARG81/MA0272.1/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TGACTCGT
GTGACTCT-

ARG81(MacIsaac)/Yeast

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TGACTCGT
GTGACTCN-

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TGACTCGT
TGACTCA-

JUND/MA0491.1/Jaspar

Match Rank:6
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TGACTCGT-
GGTGACTCATC

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGACTCGT-
TGTGACTCATT

RTG3(MacIsaac)/Yeast

Match Rank:8
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGACTCGT
ATGACTCA-

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGACTCGT-
ATGACTCATC

BATF::JUN/MA0462.1/Jaspar

Match Rank:10
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGACTCGT---
TGAGTCATTTC