common dup_qc filt_flagstat_qc pbc_qc xcor_qc final_idr_qc ENCODE award rfa ENCODE assay category ENCODE assay title species title replicate Unpaired Reads Paired Reads Unmapped Reads Unpaired Dupes Paired Dupes Paired Opt. Dupes % Dupes Reads (QC-passed) Reads (QC-failed) Dupes (QC-passed) Dupes (QC-failed) Mapped Reads % Mapped Total Read Pairs Distinct Read Pairs One Read Pair Two Read Pairs NRF = Distinct/Total PBC1 = OnePair/Distinct PBC2 = OnePair/TwoPair numReads estFragLen corr_estFragLen PhantomPeak corr_phantomPeak argmin_corr min_corr NSC RSC Nt N1 N2 Np conservative_set optimal_set rescue_ratio self_consistency_ratio reproducibility hg38 ZNF45 rep1 22688494 0 0 627979 0 0 0.027678 22060515 0 0 0 22060515 100.00 22659551 22127306 21637350 471491 0.976511 0.977857 45.891332 15000000 150 0.193929663403308 115 0.1842016 1500 0.1728713 1.121815 1.858581 0 661 0 0 N/A N/A NaN 1.0 1 hg38 ZNF250 rep1 13031841 0 0 606032 0 0 0.046504 12425809 0 0 0 12425809 100.00 13023297 12446979 11898031 525255 0.955747 0.955897 22.651914 12419780 160 0.162340407857831 55 0.15567 1500 0.1484534 1.093545 1.924322 0 6148 0 0 N/A N/A NaN 1.0 1 hg38 ZBTB18 rep1 12897493 0 0 306284 0 0 0.023748 12591209 0 0 0 12591209 100.00 12874953 12591462 12320178 264499 0.977981 0.978455 46.579299 12579193 145 0.152710013239922 50 0.1518908 1500 0.1499292 1.018547 1.41763 0 217 0 0 N/A N/A NaN 1.0 1 hg38 ZNF621 rep1 14722764 0 0 1583560 0 0 0.107559 13139204 0 0 0 13139204 100.00 14714011 13212548 11857509 1228384 0.897957 0.897443 9.652933 13132969 155 0.17455938424673 75 0.1622845 1500 0.1554189 1.123154 2.787895 0 3470 0 0 N/A N/A NaN 1.0 1 hg38 ZNF669 rep1 17454947 0 0 859478 0 0 0.04924 16595469 0 0 0 16595469 100.00 17433197 16625853 15861330 732050 0.953689 0.954016 21.667004 15000000 145 0.178994873571643 50 0.1757124 1500 0.1735119 1.0316 2.491731 0 344 0 0 N/A N/A NaN 1.0 1 hg38 KLF14 rep1 15244872 0 0 864150 0 0 0.056685 14380722 0 0 0 14380722 100.00 15237656 14427209 13661427 725713 0.946813 0.946921 18.824834 14375092 150 0.196041751676408 75 0.1866018 1500 0.1721823 1.138571 1.654666 0 13087 0 0 N/A N/A NaN 1.0 1 hg38 ZNF382 rep1 16912203 0 0 13766775 0 0 0.814014 3145428 0 0 0 3145428 100.00 16908105 3648884 1225028 402845 0.215807 0.335727 3.040941 3144688 210 0.0450985596418006 55 0.05249537 1500 0.04229503 1.066285 0.2748465 0 780 0 N/A N/A NaN 1.0 1 hg38 ZNF574 rep1 19622310 0 0 2797721 0 0 0.142579 16824589 0 0 0 16824589 100.00 19578132 17006604 14803212 1930612 0.868653 0.870439 7.667627 15000000 145 0.204500749995201 55 0.1862638 1500 0.1723313 1.186672 2.308946 0 3906 0 0 N/A N/A NaN 1.0 1 hg38 ZNF136 rep1 12222969 0 0 262846 0 0 0.021504 11960123 0 0 0 11960123 100.00 12213889 12103811 12012310 83182 0.990987 0.992440 144.409969 11953163 105 0.17763553360524 75 0.1749491 1500 0.1399476 1.269301 1.076752 0 7291 0 0 N/A N/A NaN 1.0 1 hg38 YY1 rep1 16143944 0 0 728601 0 0 0.045132 15415343 0 0 0 15415343 100.00 16139160 15456588 14812661 611491 0.957707 0.958340 24.223841 15000000 145 0.202636458767964 75 0.1937873 1500 0.173343 1.168991 1.432843 0 9432 0 0 N/A N/A NaN 1.0 1 hg38 ZNF322 rep1 21993195 0 0 1101629 0 0 0.05009 20891566 0 0 0 20891566 100.00 21976080 20936073 20003978 862271 0.952675 0.955479 23.199178 15000000 160 0.209062520474653 55 0.1904106 1500 0.1695375 1.233134 1.893585 0 29251 0 0 N/A N/A NaN 1.0 1 hg38 ZNF528 rep1 45340893 0 0 14085784 0 0 0.310664 31255109 0 0 0 31255109 100.00 45291203 33027160 24239158 6277635 0.729218 0.733916 3.861193 15000000 180 0.190846576271836 115 0.1857943 1500 0.1743272 1.09476 1.440588 0 8182 0 0 N/A N/A NaN 1.0 1 hg38 ZSCAN31 rep1 18284562 0 0 673731 0 0 0.036847 17610831 0 0 0 17610831 100.00 18280721 17637121 17021131 594864 0.964794 0.965074 28.613483 15000000 150 0.179814285276469 50 0.1777677 1500 0.1745996 1.029866 1.645985 0 1436 0 0 N/A N/A NaN 1.0 1 hg38 ZNF415 rep1 17471858 0 0 4216545 0 0 0.241334 13255313 0 0 0 13255313 100.00 17452183 13429299 10213530 2555085 0.769491 0.760541 3.997335 13245844 135 0.175389880455486 50 0.1585975 1500 0.156656 1.119586 9.64905 0 255 0 0 N/A N/A NaN 1.0 1 hg38 ZNF684 rep1 24025717 0 0 3273238 0 0 0.136239 20752479 0 0 0 20752479 100.00 23992140 20862659 18110641 2429242 0.869562 0.868089 7.455264 15000000 170 0.182626302070605 50 0.1748288 1500 0.1727319 1.057282 4.718593 0 266 0 0 N/A N/A NaN 1.0 1 hg38 ZIC2 rep1 15345473 0 0 11198706 0 0 0.729773 4146767 0 0 0 4146767 100.00 15333181 4586075 1366536 792759 0.299095 0.297975 1.723772 4143809 145 0.116682070989342 55 0.06528256 1500 0.05596008 2.085095 6.5135 0 1829 0 0 N/A N/A NaN 1.0 1 hg38 ZNF416 rep1 11151504 0 0 6115486 0 0 0.5484 5036018 0 0 0 5036018 100.00 11131110 5363092 2488571 1335278 0.481811 0.464018 1.863710 5028949 160 0.114071001291483 70 0.07000131 1500 0.06649274 1.715541 13.56056 0 910 0 N/A N/A NaN 1.0 1 hg38 ZNF519 rep1 15285026 0 0 5370660 0 0 0.351367 9914366 0 0 0 9914366 100.00 15270518 10139533 6596844 2394864 0.663994 0.650606 2.754580 9907413 135 0.163233950105051 55 0.1254394 1500 0.1229687 1.327443 16.29665 0 1007 0 N/A N/A NaN 1.0 1 hg38 ZNF454 rep1 16696405 0 0 771616 0 0 0.046214 15924789 0 0 0 15924789 100.00 16676822 15963103 15287515 646604 0.957203 0.957678 23.642778 15000000 150 0.179917248520558 70 0.1765125 1500 0.1729663 1.040187 1.960114 0 1619 0 0 N/A N/A NaN 1.0 1 hg38 CTCF rep1 6941801 0 0 1549282 0 0 0.223182 5392519 0 0 0 5392519 100.00 6938675 5483215 4341986 893709 0.790239 0.791869 4.858389 5390449 65 0.0757908232486616 50 0.07602022 1500 0.07060774 1.073407 0.9576173 0 522 0 N/A N/A NaN 1.0 1 hg38 ZNF273 rep1 16668759 0 0 680730 0 0 0.040839 15988029 0 0 0 15988029 100.00 16647816 16022991 15425461 575500 0.962468 0.962708 26.803581 15000000 150 0.17947925435286 50 0.1763492 1500 0.1736222 1.033734 2.147836 0 456 0 N/A N/A NaN 1.0 1 hg38 ZNF33A rep1 13854582 0 0 11949789 0 0 0.862515 1904793 0 0 0 1904793 100.00 13850626 2299995 757091 206879 0.166057 0.329171 3.659584 1904233 85 0.0272133685816513 50 0.02776752 1500 0.02623488 1.037297 0.6384345 0 1 0 0 N/A N/A NaN 1.0 1 hg38 ZNF653 rep1 18708845 0 0 668307 0 0 0.035721 18040538 0 0 0 18040538 100.00 18670447 18060316 17480837 560458 0.967321 0.967914 31.190271 15000000 155 0.177905674628442 50 0.175666 1500 0.1738106 1.023561 2.207056 0 57 0 N/A N/A NaN 1.0 1 hg38 ZNF16 rep1 13366422 0 0 8451706 0 0 0.632309 4914716 0 0 0 4914716 100.00 13346925 5310648 2053468 1178527 0.397893 0.386670 1.742402 4908911 140 0.111199737811177 70 0.06635562 1500 0.06448887 1.724325 25.0225 0 167 0 0 N/A N/A NaN 1.0 1 hg38 ZNF35 rep1 19051583 0 0 4619314 0 0 0.242464 14432269 0 0 0 14432269 100.00 19012867 14703817 11258654 2737293 0.773361 0.765696 4.113061 14418937 150 0.196412893906975 55 0.1739064 1500 0.1684911 1.165717 5.156098 0 2841 0 0 N/A N/A NaN 1.0 1 hg38 ZNF264 rep1 16642899 0 0 1963421 0 0 0.117973 14679478 0 0 0 14679478 100.00 16634651 14773883 13103848 1501487 0.888139 0.886960 8.727247 14673604 145 0.188291405643555 70 0.1743453 1500 0.1702113 1.106222 4.373557 0 2744 0 0 N/A N/A NaN 1.0 1 hg38 ZSCAN22 rep1 28524782 0 0 1663351 0 0 0.058312 26861431 0 0 0 26861431 100.00 28502756 27135238 25909298 1139217 0.952022 0.954821 22.743075 15000000 160 0.203041116457123 115 0.1952309 1500 0.1731978 1.172308 1.354474 0 14182 0 0 N/A N/A NaN 1.0 1 hg38 ZFP3 rep1 14058312 0 0 2174450 0 0 0.154674 11883862 0 0 0 11883862 100.00 14045110 11976758 10178454 1563445 0.852735 0.849851 6.510273 11875925 135 0.165482586254942 50 0.1458044 1500 0.1431196 1.156254 8.329709 0 1136 0 0 N/A N/A NaN 1.0 1 hg38 ZNF467 rep1 20991724 0 0 2606962 0 0 0.12419 18384762 0 0 0 18384762 100.00 20979278 18684813 16694071 1750423 0.890632 0.893457 9.537164 15000000 145 0.266724316314493 55 0.2289182 1500 0.1735547 1.536832 1.682869 0 35343 0 0 N/A N/A NaN 1.0 1 hg38 ZNF675 rep1 13775064 0 0 547957 0 0 0.039779 13227107 0 0 0 13227107 100.00 13749349 13250021 12823570 379681 0.963684 0.967815 33.774590 13213324 145 0.203358157666487 75 0.1888174 1500 0.1496215 1.359151 1.370977 0 5234 0 0 N/A N/A NaN 1.0 1 hg38 KLF10 rep1 15361032 0 0 485866 0 0 0.03163 14875166 0 0 0 14875166 100.00 15346023 14896853 14469470 413767 0.970731 0.971311 34.970092 14865398 155 0.17682124419634 70 0.1748351 1500 0.1725804 1.024573 1.880885 0 366 0 N/A N/A NaN 1.0 1 hg38 ZNF692 rep1 19384859 0 0 629888 0 0 0.032494 18754971 0 0 0 18754971 100.00 19375237 18783861 18218295 548331 0.969478 0.969891 33.224995 15000000 145 0.177533636066424 50 0.1755393 1500 0.1735439 1.02299 1.999512 0 609 0 N/A N/A NaN 1.0 1 hg38 ZNF317 rep1 16070060 0 0 2484471 0 0 0.154602 13585589 0 0 0 13585589 100.00 16052335 13696924 11644277 1790252 0.853267 0.850138 6.504267 13575929 140 0.181391700539729 55 0.1665981 1500 0.1585487 1.144076 2.83786 0 3082 0 0 N/A N/A NaN 1.0 1 hg38 ZNF41 rep1 10126659 0 0 581923 0 0 0.057464 9544736 0 0 0 9544736 100.00 10110758 9571457 9062386 483326 0.946661 0.946814 18.750049 9534567 145 0.125413781155521 70 0.1208577 1500 0.1178359 1.064309 2.507766 0 716 0 0 N/A N/A NaN 1.0 1 hg38 MZF1 rep1 20058721 0 0 1205292 0 0 0.060088 18853429 0 0 0 18853429 100.00 20041927 18922554 17869951 996690 0.944148 0.944373 17.929297 15000000 145 0.185343597759644 70 0.1779126 1500 0.1736231 1.067506 2.732346 0 3809 0 0 N/A N/A NaN 1.0 1 hg38 ZNF200 rep1 15459555 0 0 578031 0 0 0.03739 14881524 0 0 0 14881524 100.00 15437371 14893314 14374705 500712 0.964757 0.965178 28.708529 14869838 150 0.177568038670023 50 0.1753008 1500 0.1731317 1.025624 2.045244 0 411 0 0 N/A N/A NaN 1.0 1 hg38 ZNF189 rep1 21982739 0 0 1204795 0 0 0.054806 20777944 0 0 0 20777944 100.00 21934806 20846381 19823114 970011 0.950379 0.950914 20.435968 15000000 155 0.19067240846311 55 0.1828792 1500 0.1742755 1.094086 1.905799 0 11667 0 0 N/A N/A NaN 1.0 1 hg38 ZBTB12 rep1 13244743 0 0 5350336 0 0 0.403959 7894407 0 0 0 7894407 100.00 13238308 8077208 4831741 1976572 0.610139 0.598194 2.444505 7891025 160 0.130064736810981 55 0.1016874 1500 0.09856798 1.319543 10.09687 0 885 0 N/A N/A NaN 1.0 1 hg38 ZNF71 rep1 17318903 0 0 446945 0 0 0.025807 16871958 0 0 0 16871958 100.00 17303093 16892363 16499954 380648 0.976263 0.976770 43.347014 15000000 155 0.179812010789203 70 0.1778202 1500 0.1742031 1.032198 1.550669 0 1985 0 N/A N/A NaN 1.0 1